| GO:0005634 | nucleus | 29 |
| GO:0005667 | transcription factor complex | 29 |
| GO:0007179 | transforming growth factor beta receptor signaling pathway | 29 |
| GO:0006351 | transcription, DNA-templated | 28 |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding | 28 |
| GO:0045887 | positive regulation of synaptic growth at neuromuscular junction | 1 |
| GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding | 1 |
| GO:0001745 | compound eye morphogenesis | 1 |
| GO:0001102 | RNA polymerase II activating transcription factor binding | 1 |
| GO:0042078 | germ-line stem cell division | 1 |
| GO:0007488 | histoblast morphogenesis | 1 |
| GO:0007391 | dorsal closure | 1 |
| GO:0045705 | negative regulation of salivary gland boundary specification | 1 |
| GO:0030718 | germ-line stem cell population maintenance | 1 |
| GO:0005737 | cytoplasm | 1 |
| GO:0035290 | trunk segmentation | 1 |
| GO:0006366 | transcription from RNA polymerase II promoter | 1 |
| GO:0003705 | transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | 1 |
| GO:0043565 | sequence-specific DNA binding | 1 |
| GO:0006357 | regulation of transcription from RNA polymerase II promoter | 1 |
| GO:0048100 | wing disc anterior/posterior pattern formation | 1 |
| GO:0010629 | negative regulation of gene expression | 1 |
| GO:0045595 | regulation of cell differentiation | 1 |
| GO:0005515 | protein binding | 1 |
| GO:0061353 | BMP signaling pathway involved in Malpighian tubule cell chemotaxis | 1 |
| GO:2000134 | negative regulation of G1/S transition of mitotic cell cycle | 1 |
| GO:0007507 | heart development | 1 |
| GO:0035019 | somatic stem cell population maintenance | 1 |
| GO:0007476 | imaginal disc-derived wing morphogenesis | 1 |
| GO:0007480 | imaginal disc-derived leg morphogenesis | 1 |
| GO:0007424 | open tracheal system development | 1 |
| GO:0046872 | metal ion binding | 1 |
| GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 1 |
| GO:0030707 | ovarian follicle cell development | 1 |
| GO:0001105 | RNA polymerase II transcription coactivator activity | 1 |
| GO:0008586 | imaginal disc-derived wing vein morphogenesis | 1 |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | 1 |
